Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012599.1 Corchorus capsularis cultivar CVL-1 contig12620, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  52280

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4298--4332
16
2.2
16
100
0
70
11
17
25
45
1.81
7581--7620
16
2.5
17
80
15
50
60
0
17
22
1.37
11345--11436
31
3.0
31
73
12
100
18
22
25
33
1.97
11335--11438
31
3.5
30
76
7
88
20
25
24
30
1.98
13796--13833
20
1.9
20
94
0
67
5
34
31
28
1.80
13796--13844
20
2.5
20
82
0
62
4
38
30
26
1.75
14718--14978
134
1.9
134
83
9
336
31
25
21
22
1.98
37539--37702
31
5.6
31
75
12
130
18
21
25
34
1.96
37591--37693
53
1.9
53
86
0
143
17
19
25
37
1.93
38377--38505
63
2.0
63
88
2
188
27
20
18
33
1.96

Tables:   1

The End!