Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012602.1 Corchorus capsularis cultivar CVL-1 contig12623, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23120

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
825--893
22
3.2
22
68
12
70
31
36
11
20
1.88
803--898
43
2.2
43
100
0
192
30
35
11
22
1.90
804--871
21
3.2
21
68
12
66
30
32
13
23
1.93
3721--3770
2
25.0
2
80
15
59
46
4
2
48
1.32
3721--3770
11
5.0
10
85
9
59
46
4
2
48
1.32
4474--4500
7
3.9
7
100
0
54
29
25
0
44
1.54
4748--4807
16
3.8
16
81
0
66
10
13
35
41
1.78
5439--5496
7
8.3
7
100
0
116
55
0
13
31
1.39
10627--10667
12
3.4
12
80
12
57
58
14
4
21
1.55
13965--13990
13
2.0
13
100
0
52
7
53
0
38
1.30
20233--20285
21
2.6
21
87
3
72
7
32
32
28
1.85
20472--20503
11
2.9
11
95
0
55
53
25
9
12
1.68
21686--21769
22
3.8
23
76
6
84
41
9
11
36
1.75
21961--22009
6
8.2
6
100
0
98
67
16
0
16
1.24

Tables:   1

The End!