Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012612.1 Corchorus capsularis cultivar CVL-1 contig12633, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35538

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
770--807
18
2.1
18
100
0
76
26
10
28
34
1.90
12183--12215
17
1.9
17
93
0
57
30
15
15
39
1.88
15044--15091
16
3.1
16
77
14
55
52
6
16
25
1.67
20644--20696
27
2.0
27
85
7
74
39
9
1
49
1.46
21627--21684
21
2.8
21
92
2
91
51
0
13
34
1.42
23269--23337
36
1.9
36
90
0
111
40
18
23
17
1.91
33518--33604
18
5.0
18
73
4
81
31
22
3
42
1.70
33528--33603
36
2.1
36
97
0
143
31
25
2
40
1.69
33528--33585
3
19.3
3
85
0
71
32
27
1
37
1.67
34665--34752
45
2.0
45
90
0
140
48
14
5
30
1.67
35105--35147
21
2.0
22
86
4
61
18
37
9
34
1.83

Tables:   1

The End!