Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012614.1 Corchorus capsularis cultivar CVL-1 contig12635, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29698

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
8454--8493
21
1.9
21
94
0
71
52
20
12
15
1.74
9740--9781
11
3.8
11
87
0
57
50
2
4
42
1.36
9735--9781
22
2.1
22
96
0
85
48
4
4
42
1.42
10353--10613
130
2.0
130
99
0
513
27
14
13
45
1.81
11212--11323
56
1.9
59
94
5
203
36
11
12
39
1.80
11816--11845
3
9.7
3
92
7
51
63
0
0
36
0.95
11819--11844
13
2.0
13
100
0
52
61
0
0
38
0.96
11928--11969
21
2.0
21
100
0
84
42
4
23
28
1.74
22561--22607
24
2.0
24
95
0
85
27
10
12
48
1.74
27898--27944
24
2.0
24
86
0
67
27
8
14
48
1.73

Tables:   1

The End!