Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012619.1 Corchorus capsularis cultivar CVL-1 contig12640, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  33824

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9752--9815
21
3.0
21
63
17
51
46
10
7
34
1.68
16950--16987
19
2.0
19
100
0
76
31
26
0
42
1.56
17008--17104
50
2.0
49
93
2
167
34
18
10
37
1.85
22885--23489
22
28.0
22
69
14
233
35
15
9
39
1.80
23174--23275
23
4.5
23
83
9
104
37
12
6
43
1.70
22885--24157
44
29.4
44
67
14
359
35
16
9
38
1.81
23191--23358
82
2.0
85
80
5
191
35
14
7
42
1.74
23388--23426
20
2.0
20
100
0
78
25
23
10
41
1.86
23526--24157
22
28.7
22
69
13
140
35
17
9
37
1.83
23953--24158
22
9.3
22
79
10
188
38
18
8
33
1.82
24324--24360
19
1.9
19
89
10
58
64
0
5
29
1.15
24490--24538
15
3.5
15
68
21
52
57
0
8
34
1.29
24557--24624
31
2.2
33
86
10
106
48
7
14
29
1.71
25925--25955
9
3.4
9
90
0
53
12
29
9
48
1.73
33413--33448
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!