Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012622.1 Corchorus capsularis cultivar CVL-1 contig12643, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25441

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
181--222
9
5.0
8
78
21
50
83
0
14
2
0.75
4832--4864
2
16.5
2
100
0
66
48
0
0
51
1.00
5112--5220
36
3.0
36
66
17
98
42
16
13
27
1.86
8495--8551
6
9.5
6
100
0
114
17
33
31
17
1.93
14197--14270
36
2.1
36
94
0
130
17
17
39
25
1.91
14927--15236
156
2.0
150
82
4
370
27
21
19
32
1.97
19743--19824
2
41.0
2
92
0
92
50
41
1
7
1.38
22485--22519
1
35.0
1
100
0
70
100
0
0
0
0.00

Tables:   1

The End!