Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012629.1 Corchorus capsularis cultivar CVL-1 contig12650, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11742

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
794--850
27
2.1
28
90
9
91
8
26
7
57
1.54
3484--3527
17
2.6
17
96
0
79
40
0
20
38
1.53
5324--5375
22
2.3
21
78
18
52
38
7
0
53
1.30
6630--7252
22
27.9
22
66
20
135
38
9
16
35
1.82
7060--7250
44
4.4
44
73
7
158
43
9
13
33
1.75
7292--7347
28
2.0
28
100
0
112
39
10
17
32
1.84
7333--7608
22
13.0
22
72
11
146
41
8
15
34
1.77
7330--7628
66
4.7
63
73
13
227
41
8
15
34
1.77
7900--7943
22
2.0
22
86
8
63
38
4
13
43
1.65

Tables:   1

The End!