Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012642.1 Corchorus capsularis cultivar CVL-1 contig12663, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  37552

Tables:   1   

This is table  1  of  1  ( 15 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
644--760
15
8.8
13
69
23
75
44
1
1
52
1.21
639--789
39
4.1
37
73
22
115
45
1
1
51
1.21
639--778
13
10.4
14
70
18
102
46
1
1
50
1.19
639--808
41
4.2
39
75
17
134
44
2
1
52
1.21
733--768
6
6.5
6
87
12
51
50
0
0
50
1.00
717--778
18
3.4
18
76
22
67
50
0
0
50
1.00
832--873
21
2.0
22
90
4
68
30
35
28
4
1.78
8116--8178
31
2.0
31
93
0
108
36
23
28
11
1.89
9490--9523
2
17.0
2
100
0
68
50
0
0
50
1.00
12330--12361
13
2.4
14
90
10
50
62
0
0
37
0.95
14018--14046
15
1.9
15
100
0
58
13
0
0
86
0.58
17137--17207
37
1.9
37
91
0
115
35
18
8
38
1.81
17236--17295
31
1.9
31
93
0
102
36
15
11
36
1.83
33891--34002
54
2.1
54
100
0
224
42
8
5
43
1.56
36851--36910
27
2.3
26
88
5
93
48
8
11
31
1.69

Tables:   1

The End!