Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012644.1 Corchorus capsularis cultivar CVL-1 contig12665, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  32772

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
261--667
202
2.0
203
82
5
495
33
13
17
35
1.88
3096--3162
30
2.2
30
89
0
98
26
25
17
29
1.98
6814--7101
143
2.0
143
94
0
504
40
11
18
29
1.85
17518--17566
6
8.3
6
77
4
55
51
0
12
36
1.40
18907--19062
78
2.0
78
82
7
192
32
19
25
23
1.97
19480--19590
54
2.1
54
84
6
145
35
17
28
18
1.94
27179--27218
19
2.0
20
95
4
73
0
20
0
80
0.72
28097--28175
32
2.5
32
82
0
95
18
11
30
39
1.86
28399--28433
15
2.3
15
90
0
52
8
11
20
60
1.57
28397--28450
16
3.5
15
75
9
54
7
7
24
61
1.49
29033--29103
25
2.7
27
78
8
74
66
15
8
9
1.44

Tables:   1

The End!