Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012645.1 Corchorus capsularis cultivar CVL-1 contig12666, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  6877

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1442--1518
40
1.9
41
84
7
104
33
12
15
37
1.86
3413--3450
18
2.2
18
90
4
60
52
5
2
39
1.38
3847--3893
22
2.2
21
85
11
60
34
12
10
42
1.78
4040--4104
34
1.9
34
81
9
80
35
7
9
47
1.64
4099--4160
32
1.9
32
100
0
124
37
8
3
51
1.48
4201--4241
21
1.9
21
90
5
64
43
7
0
48
1.30
6323--6365
17
2.6
16
85
10
59
20
23
20
34
1.96

Tables:   1

The End!