Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012655.1 Corchorus capsularis cultivar CVL-1 contig12676, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27666

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
20837--20863
2
13.5
2
100
0
54
51
48
0
0
1.00
21022--21052
12
2.6
12
89
0
53
6
61
6
25
1.45
21372--21731
135
2.7
135
86
0
468
28
18
18
34
1.95
22499--22569
30
2.4
31
85
7
101
33
16
2
46
1.62
22677--22774
38
2.6
37
77
3
106
16
18
9
56
1.66
23790--23854
26
2.4
27
80
14
73
36
0
3
60
1.13
23942--23979
10
3.9
10
89
3
60
47
39
13
0
1.42
24543--24726
22
8.3
21
73
10
129
33
8
17
39
1.81
24766--24888
22
5.5
22
74
9
88
35
7
19
37
1.80
25008--25034
14
1.9
14
100
0
54
44
14
3
37
1.63
25022--25146
22
5.6
22
76
5
117
43
10
13
32
1.78
25271--25766
22
22.5
22
67
15
105
37
9
16
35
1.82
25440--25524
23
3.7
23
76
7
84
40
7
15
37
1.74
25730--25777
22
2.2
22
85
3
62
50
4
16
29
1.64

Tables:   1

The End!