Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012656.1 Corchorus capsularis cultivar CVL-1 contig12677, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  16602

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--36
2
18.0
2
100
0
72
50
0
0
50
1.00
2161--2252
32
2.9
32
93
0
148
38
22
11
27
1.89
2235--2743
31
16.6
30
88
3
599
33
17
17
30
1.94
2235--2742
61
8.3
61
87
5
605
33
17
17
30
1.94
13482--13508
13
2.1
13
100
0
54
77
0
22
0
0.76
13588--13634
2
25.0
2
81
12
55
51
0
0
48
1.00
14741--14837
38
2.6
38
80
6
117
15
18
11
54
1.70
15749--15802
27
2.0
27
100
0
108
25
18
44
11
1.83

Tables:   1

The End!