Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012657.1 Corchorus capsularis cultivar CVL-1 contig12678, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27436

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2794--2836
21
2.0
21
95
4
77
51
9
18
20
1.74
2826--3064
92
2.6
92
99
0
469
37
16
20
25
1.93
4582--4625
21
2.1
21
91
8
72
52
2
13
31
1.53
7066--7111
21
2.2
21
92
0
74
39
6
17
36
1.76
15155--15211
29
2.0
29
96
0
105
50
10
33
5
1.59
16326--16491
84
2.0
84
93
0
287
30
7
20
41
1.79
17680--17724
23
2.0
23
100
0
90
31
22
35
11
1.89
18594--18638
23
2.0
23
90
0
72
33
20
33
13
1.91
20468--20545
16
4.9
16
79
0
93
50
32
12
5
1.63
20701--20764
16
4.1
15
76
9
65
37
34
9
18
1.83
20699--20761
32
2.0
32
96
0
117
38
34
9
17
1.82

Tables:   1

The End!