Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012660.1 Corchorus capsularis cultivar CVL-1 contig12681, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11044

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
483--516
12
2.7
13
90
4
52
20
11
8
58
1.59
513--539
6
4.5
6
100
0
54
29
0
14
55
1.40
1389--1444
15
3.4
18
72
25
61
50
0
0
50
1.00
1388--1514
15
8.5
15
67
23
56
49
1
2
46
1.24
1361--1522
39
4.1
38
71
18
109
50
1
3
45
1.25
1407--1517
13
8.8
13
66
25
51
49
1
2
45
1.26
4065--4097
17
1.9
17
93
0
57
27
48
21
3
1.64
4087--4161
16
4.8
16
96
3
143
41
40
13
5
1.67
4087--4161
31
2.4
32
97
2
143
41
40
13
5
1.67
4061--4098
6
6.5
6
81
6
51
31
44
21
2
1.66
8165--8212
22
2.2
22
100
0
96
29
20
18
31
1.97
8438--8800
181
2.0
182
91
3
597
33
13
9
44
1.75
8783--8820
11
3.5
11
85
10
51
57
0
0
42
0.98

Tables:   1

The End!