Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012677.1 Corchorus capsularis cultivar CVL-1 contig12698, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  4671

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
566--617
26
2.0
26
100
0
104
30
19
26
23
1.98
994--1142
35
4.1
35
74
13
120
28
26
17
27
1.98
999--1149
78
1.9
77
83
1
194
27
27
17
27
1.97
1179--1487
54
5.7
54
86
3
388
32
20
15
31
1.94
1185--1487
162
1.9
163
86
2
439
32
20
15
32
1.93
3785--3823
14
2.8
14
84
11
53
33
12
7
46
1.71
3779--3829
26
2.0
25
81
14
59
37
11
5
45
1.65

Tables:   1

The End!