Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012692.1 Corchorus capsularis cultivar CVL-1 contig12713, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  40942

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3017--3106
45
2.0
45
89
4
137
23
22
20
34
1.97
6457--6523
21
3.2
21
76
4
64
41
26
8
22
1.83
9508--9871
36
10.2
35
75
13
241
46
8
17
26
1.77
11482--11524
22
2.0
22
90
0
68
20
27
27
23
1.99
11746--11808
28
2.2
28
97
0
117
39
6
26
26
1.80
26675--26699
2
12.5
2
100
0
50
48
0
0
52
1.00
28928--29090
80
2.0
80
97
0
308
43
11
14
30
1.81
36494--36522
2
14.5
2
100
0
58
48
0
0
51
1.00
37663--37688
4
6.5
4
100
0
52
23
0
0
76
0.78

Tables:   1

The End!