Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012696.1 Corchorus capsularis cultivar CVL-1 contig12717, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43714

Tables:   1   

This is table  1  of  1  ( 18 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1412--1436
10
2.5
10
100
0
50
32
8
20
40
1.81
10607--10682
40
1.9
40
94
0
134
46
5
18
30
1.71
10687--10838
39
3.8
39
85
5
189
46
11
13
28
1.78
10687--10843
78
2.0
79
86
3
219
47
11
13
27
1.77
10680--10880
39
5.0
42
78
11
188
47
11
13
26
1.77
10687--10889
80
2.6
78
80
10
216
48
11
13
26
1.77
10894--11537
39
17.3
39
88
8
876
47
8
19
24
1.77
10894--11537
74
8.7
74
89
7
938
47
8
19
24
1.77
11564--11724
36
4.7
33
78
8
151
44
4
21
29
1.73
11585--11709
36
3.6
35
85
6
173
39
5
23
32
1.78
11564--11724
69
2.3
69
92
0
259
44
4
21
29
1.73
16409--16451
21
2.0
22
86
4
61
37
4
20
37
1.74
19050--19295
129
1.9
129
89
3
379
21
31
20
26
1.98
19552--19643
45
2.0
45
100
0
184
15
8
20
55
1.66
22461--22494
16
2.1
17
88
5
52
52
0
29
17
1.45
31185--31222
3
12.7
3
100
0
76
0
34
0
65
0.93
38970--39008
1
39.0
1
100
0
78
100
0
0
0
0.00
40032--40086
16
3.5
15
80
9
56
47
32
10
9
1.70

Tables:   1

The End!