Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012705.1 Corchorus capsularis cultivar CVL-1 contig12726, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14602

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
485--795
158
2.0
159
93
1
536
18
20
10
50
1.77
1970--2077
54
2.0
53
89
1
162
24
32
22
21
1.98
2858--2945
30
2.8
30
87
5
113
9
27
38
25
1.86
9393--9475
30
2.6
31
84
11
114
8
27
39
24
1.84
10975--11010
19
1.9
18
88
5
54
33
22
2
41
1.68

Tables:   1

The End!