Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012706.1 Corchorus capsularis cultivar CVL-1 contig12727, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  14399

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3257--3318
32
1.9
32
86
0
88
37
22
20
19
1.95
3373--3436
24
2.7
24
90
0
92
17
29
34
18
1.94
6185--6234
2
25.0
2
91
0
82
46
2
2
50
1.24
11178--11338
67
2.4
68
90
6
260
38
6
10
44
1.64
12028--12081
24
2.2
24
78
12
58
35
14
20
29
1.93

Tables:   1

The End!