Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012711.1 Corchorus capsularis cultivar CVL-1 contig12732, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  7774

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2633--2664
11
2.9
11
90
0
55
37
0
18
43
1.51
2633--2692
22
2.9
22
76
19
65
41
3
18
36
1.67
2643--2680
19
2.1
18
90
5
58
44
2
21
31
1.66
4014--4044
6
5.3
6
96
3
55
35
0
12
51
1.40
5487--5527
15
2.7
15
96
0
73
43
21
26
7
1.79
7104--7137
9
3.8
9
96
0
59
14
11
20
52
1.73

Tables:   1

The End!