Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012712.1 Corchorus capsularis cultivar CVL-1 contig12733, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  3372

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
698--729
11
2.9
11
90
0
55
37
0
18
43
1.51
698--757
22
2.9
22
76
19
65
41
3
18
36
1.67
708--745
19
2.1
18
90
5
58
44
2
21
31
1.66
742--812
19
3.4
19
67
29
54
47
7
18
26
1.74
721--821
45
2.2
45
100
0
202
44
5
20
28
1.75
727--802
22
3.4
22
68
22
68
46
6
18
28
1.74

Tables:   1

The End!