Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012722.1 Corchorus capsularis cultivar CVL-1 contig12743, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15694

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1063--1094
2
16.5
2
93
6
57
53
0
0
46
1.00
2793--2832
16
2.5
16
87
0
53
52
30
10
7
1.62
3037--3143
32
3.3
32
85
0
133
38
36
12
13
1.81
3089--3141
16
3.2
17
84
10
83
39
41
5
13
1.68
3071--3141
16
4.4
17
77
12
78
38
40
8
12
1.74
3074--3128
15
3.5
15
80
9
65
40
40
7
12
1.71
5874--5952
33
2.4
33
80
4
97
6
27
43
22
1.78
5925--5998
23
3.2
23
96
0
130
10
32
33
22
1.89
11396--11429
5
6.8
5
87
12
52
17
0
0
82
0.67
11503--11536
17
2.0
17
94
0
59
23
5
14
55
1.61
12437--12516
33
2.4
33
81
4
99
6
27
42
23
1.78

Tables:   1

The End!