Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012738.1 Corchorus capsularis cultivar CVL-1 contig12759, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  21745

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4--37
2
17.0
2
100
0
68
50
0
0
50
1.00
1511--1541
16
1.9
16
93
0
53
35
9
0
54
1.33
1879--2863
199
5.0
201
85
6
1311
35
17
12
34
1.88
5554--5593
19
2.0
20
85
4
55
37
0
15
47
1.45
8262--8485
72
3.1
71
89
1
322
16
20
39
24
1.91
15577--15639
2
35.5
2
71
23
52
46
0
1
52
1.10
15575--15640
21
3.2
20
79
16
80
45
0
1
53
1.09
15580--15639
19
2.8
23
80
14
74
46
0
1
51
1.10
18020--18066
22
2.2
21
77
7
51
29
10
8
51
1.66
20894--20945
24
2.2
24
83
13
63
57
3
0
38
1.17

Tables:   1

The End!