Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012743.1 Corchorus capsularis cultivar CVL-1 contig12764, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5910

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21--79
14
4.3
14
81
10
68
42
6
11
38
1.68
20--79
28
2.2
28
82
8
79
41
6
11
40
1.68
726--767
11
3.9
11
87
9
52
88
0
11
0
0.53
730--765
8
4.5
8
86
13
56
88
0
11
0
0.50
726--767
10
4.3
10
84
6
59
88
0
11
0
0.53
2665--2825
45
3.6
45
90
0
241
27
22
17
32
1.96
3240--3307
32
2.1
33
86
5
93
27
8
14
48
1.74

Tables:   1

The End!