Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012746.1 Corchorus capsularis cultivar CVL-1 contig12767, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10131

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
631--655
7
3.6
7
100
0
50
56
0
28
16
1.41
644--743
33
3.2
33
64
28
83
50
9
22
19
1.75
648--831
59
3.1
59
88
3
248
52
7
21
17
1.69
790--1023
7
33.7
7
63
18
53
56
2
24
16
1.54
790--832
19
2.3
19
87
0
59
55
4
23
16
1.59
841--903
20
3.5
20
65
24
57
61
3
22
12
1.45
808--1038
35
6.6
35
84
8
290
56
3
22
17
1.56
844--917
34
2.4
29
71
26
71
58
2
24
14
1.50
1062--1128
21
3.1
21
72
10
64
50
7
16
25
1.71
3886--3929
14
3.3
13
81
12
54
40
6
13
38
1.71
3872--3929
26
2.2
26
81
12
64
43
6
10
39
1.66
6813--6923
45
2.5
45
90
0
168
28
19
15
36
1.93
7148--7205
26
2.3
26
85
8
84
22
20
22
34
1.97
7328--7426
51
1.9
53
93
4
175
65
3
15
16
1.39

Tables:   1

The End!