Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012757.1 Corchorus capsularis cultivar CVL-1 contig12778, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  15538

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3428--3466
15
2.6
16
80
12
55
35
17
10
35
1.84
3523--3620
41
2.3
42
92
5
171
5
22
11
61
1.49
6283--6322
17
2.4
17
91
0
62
12
2
15
70
1.28
9728--9779
25
2.1
25
96
0
95
55
15
9
19
1.67
12024--12075
21
2.5
21
80
0
59
21
30
36
11
1.89

Tables:   1

The End!