Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012762.1 Corchorus capsularis cultivar CVL-1 contig12783, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  10708

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2077--2112
13
2.8
13
86
0
54
27
2
2
66
1.19
6094--6137
21
2.0
22
86
4
63
20
22
4
52
1.65
6106--6231
21
6.3
21
69
14
97
22
22
5
50
1.70
6159--6259
35
2.9
34
86
2
130
22
21
6
48
1.74
6142--6300
56
2.8
55
75
9
151
22
22
6
48
1.74
6211--6246
14
2.5
15
90
9
65
19
25
5
50
1.69
6196--6237
21
2.0
21
81
9
50
23
19
7
50
1.72
6229--6305
21
3.6
21
78
5
66
22
22
6
49
1.72
6592--6647
16
3.4
16
70
20
53
23
16
7
53
1.67
7296--7415
37
3.0
40
71
9
138
42
20
10
27
1.83
7301--7428
41
3.2
39
70
9
125
39
20
8
31
1.82
10488--10534
2
24.0
2
85
12
62
46
4
0
48
1.21

Tables:   1

The End!