Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012764.1 Corchorus capsularis cultivar CVL-1 contig12785, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11658

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3109--3155
22
2.1
23
88
4
69
57
8
2
31
1.41
3386--3429
21
2.1
21
91
0
70
31
9
40
18
1.81
8474--8559
39
2.3
35
78
20
95
56
1
40
1
1.14
8490--8558
33
2.1
33
86
5
95
57
0
40
1
1.07
8490--8559
24
2.9
24
75
8
70
58
0
40
1
1.07
9932--10014
32
2.6
32
83
5
98
9
37
42
10
1.73
10106--10202
33
2.9
33
79
11
110
13
42
31
12
1.81
10259--10417
33
4.9
33
94
1
234
12
30
42
14
1.83
10259--10417
65
2.5
66
89
3
234
12
30
42
14
1.83

Tables:   1

The End!