Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012766.1 Corchorus capsularis cultivar CVL-1 contig12787, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34746

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3228--3300
16
4.6
16
75
3
76
6
13
38
41
1.72
16140--16194
17
3.5
17
76
23
75
29
5
10
54
1.57
16138--16204
29
2.3
29
97
0
125
26
5
11
55
1.59
16952--17021
28
2.5
28
100
0
140
45
11
12
30
1.78
21065--21093
2
14.5
2
100
0
58
51
0
0
48
1.00
22318--22879
279
2.0
279
97
0
1052
31
13
24
30
1.93
29798--29845
1
48.0
1
82
0
60
91
8
0
0
0.41
29799--29846
9
5.0
10
85
10
73
89
10
0
0
0.48
29793--29846
19
2.8
19
86
13
83
87
11
0
1
0.63
34127--34197
6
12.2
6
71
21
53
36
46
15
1
1.55
34139--34183
15
2.9
16
83
6
56
44
40
13
2
1.56
34700--34734
17
2.1
16
94
5
61
22
40
0
37
1.55

Tables:   1

The End!