Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012775.1 Corchorus capsularis cultivar CVL-1 contig12796, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26263

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2143--2225
27
3.1
27
83
0
103
40
6
12
40
1.67
7023--7080
27
2.1
27
96
0
107
43
5
10
41
1.61
6947--7219
135
2.0
135
98
0
528
39
4
16
40
1.68
7158--7236
27
2.9
27
90
0
122
43
6
10
40
1.64
10520--10560
17
2.5
16
84
7
55
80
0
0
19
0.71
20461--20497
18
2.1
18
90
5
58
18
10
0
70
1.16
22220--22252
16
2.0
17
88
5
50
24
0
0
75
0.80
22256--22324
31
2.2
31
92
0
111
39
13
18
28
1.88
24994--26016
429
2.3
434
81
6
1131
30
13
12
43
1.82

Tables:   1

The End!