Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012777.1 Corchorus capsularis cultivar CVL-1 contig12798, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  43805

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
236--297
30
2.1
29
88
8
90
30
17
32
19
1.95
10372--10405
6
5.7
6
100
0
68
85
0
0
14
0.60
10365--10405
18
2.3
18
91
0
64
80
2
2
14
0.92
12994--13072
33
2.4
34
76
6
90
25
10
22
41
1.85
13538--13600
30
2.1
30
88
5
92
28
19
31
20
1.97
21180--21209
11
2.7
11
94
0
51
40
20
0
40
1.52
21159--21197
19
2.1
18
85
4
51
30
17
5
46
1.70
24162--24201
15
2.7
15
96
0
71
7
30
20
42
1.79
25286--25323
18
2.2
17
86
9
51
18
15
7
57
1.62
25637--25673
18
2.1
17
90
5
56
51
10
2
35
1.51
28571--28604
11
3.2
10
84
15
50
50
17
2
29
1.61
31835--31872
20
2.0
19
85
10
51
18
7
13
60
1.56
37054--37113
21
2.8
21
76
14
59
8
46
26
18
1.77
37581--37611
9
3.3
9
95
4
53
38
0
19
41
1.51

Tables:   1

The End!