Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012790.1 Corchorus capsularis cultivar CVL-1 contig12811, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25643

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1009--1174
81
2.1
79
93
5
282
50
0
13
35
1.47
1103--1234
62
2.1
63
87
7
187
48
0
12
37
1.47
1534--1591
29
2.0
29
93
0
98
20
18
18
41
1.91
2283--2339
28
2.0
28
93
0
96
40
12
22
24
1.88
11350--11412
20
3.2
19
86
4
81
25
11
22
41
1.86
11358--11412
20
2.8
20
94
0
92
27
12
23
36
1.91
23682--23738
30
1.9
29
82
3
69
40
7
17
35
1.77

Tables:   1

The End!