Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012792.1 Corchorus capsularis cultivar CVL-1 contig12813, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34711

Tables:   1   

This is table  1  of  1  ( 14 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1028--1296
75
3.6
75
90
2
432
34
18
7
40
1.78
2548--3397
35
24.3
35
88
2
1183
36
18
18
26
1.94
3370--3801
35
12.4
35
95
0
740
32
22
15
29
1.94
2576--3782
70
17.3
70
87
3
975
35
19
17
27
1.95
2548--3802
175
7.2
177
87
4
1145
35
19
17
27
1.95
6364--6390
6
4.5
6
100
0
54
14
51
14
18
1.76
11190--11458
76
3.6
75
89
3
416
34
17
7
40
1.77
12206--12234
14
2.1
14
100
0
58
51
20
0
27
1.47
17215--17249
16
2.2
16
100
0
70
45
17
25
11
1.81
27587--27628
20
2.0
21
90
4
68
33
21
19
26
1.97
29354--29418
32
2.0
32
81
0
76
29
10
7
52
1.64
32467--32514
22
2.3
20
86
10
62
39
25
16
18
1.91
32486--32584
31
3.2
31
82
0
117
37
26
18
18
1.93
34295--34337
2
21.5
2
100
0
86
48
0
0
51
1.00

Tables:   1

The End!