Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012799.1 Corchorus capsularis cultivar CVL-1 contig12820, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  18613

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
469--507
20
1.9
21
94
5
71
58
10
0
30
1.31
514--670
74
2.1
74
94
2
271
40
8
29
21
1.83
1137--1195
27
2.1
29
87
6
86
42
1
13
42
1.54
3239--3327
37
2.4
37
82
0
106
14
38
20
26
1.91
17712--17864
81
1.9
79
91
2
252
32
7
11
49
1.67

Tables:   1

The End!