Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012801.1 Corchorus capsularis cultivar CVL-1 contig12822, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23632

Tables:   1   

This is table  1  of  1  ( 12 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1--39
2
20.5
2
84
10
55
48
2
0
48
1.15
222--1137
440
2.1
439
82
3
1112
26
13
17
41
1.87
8949--9017
35
2.0
35
88
0
102
31
20
11
36
1.88
9163--9196
12
2.9
12
95
4
61
44
8
17
29
1.79
12814--12874
29
2.1
29
96
0
113
32
16
21
29
1.95
12879--12975
33
2.9
32
84
6
131
27
20
19
31
1.97
13010--13083
32
2.2
33
88
4
105
48
4
27
20
1.67
13144--13213
36
1.9
36
88
0
104
22
18
14
44
1.86
19050--19133
42
2.0
42
100
0
168
47
4
23
23
1.70
20872--20960
39
2.3
39
98
0
169
3
29
13
53
1.55
22617--22648
15
2.1
15
100
0
64
34
6
0
59
1.23
23510--23584
30
2.5
31
82
6
91
28
28
17
26
1.98

Tables:   1

The End!