Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012808.1 Corchorus capsularis cultivar CVL-1 contig12829, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  55607

Tables:   1   

This is table  1  of  1  ( 10 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
4272--4308
19
2.0
19
89
5
58
35
0
0
64
0.94
7191--7227
13
2.8
13
87
0
56
16
43
8
32
1.77
7861--7939
38
2.0
40
90
4
126
25
15
8
50
1.72
16844--16883
7
5.7
7
100
0
80
30
45
25
0
1.54
28140--28200
29
2.2
29
94
5
108
18
9
9
62
1.53
29676--29703
10
2.8
10
100
0
56
92
7
0
0
0.37
31954--31994
17
2.4
17
88
8
57
53
0
4
41
1.22
34830--34907
31
2.5
31
85
0
93
33
21
28
16
1.95
34850--34991
31
4.8
31
72
15
113
35
24
25
14
1.94
34896--34942
23
2.0
23
83
0
58
36
25
23
14
1.93

Tables:   1

The End!