Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012816.1 Corchorus capsularis cultivar CVL-1 contig12837, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34561

Tables:   1   

This is table  1  of  1  ( 7 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
23129--23175
3
15.7
3
100
0
94
0
34
0
65
0.93
31591--31619
9
3.3
9
95
4
51
82
0
17
0
0.66
33840--33864
12
2.1
12
100
0
50
40
12
24
24
1.88
34076--34150
32
2.3
33
86
2
98
12
44
36
8
1.71
34076--34156
33
2.5
32
85
2
99
11
40
38
9
1.74
34076--34178
33
3.2
33
76
12
88
10
39
38
10
1.75
34392--34433
18
2.3
19
87
4
59
4
11
0
83
0.79

Tables:   1

The End!