Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012817.1 Corchorus capsularis cultivar CVL-1 contig12838, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  29936

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
13--77
33
2.0
33
87
6
96
12
32
41
13
1.82
8821--8862
14
2.7
15
82
14
50
54
4
26
14
1.59
8861--8904
21
2.1
21
87
8
63
38
11
27
22
1.88
15794--15822
2
14.5
2
100
0
58
48
0
0
51
1.00
29842--29936
2
47.5
2
97
0
181
49
1
49
0
1.07

Tables:   1

The End!