Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012819.1 Corchorus capsularis cultivar CVL-1 contig12840, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  26084

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
3212--3250
20
1.9
20
89
5
60
58
7
2
30
1.39
3257--3413
74
2.1
74
91
2
262
40
8
29
21
1.83
3497--3538
2
21.0
2
90
9
68
50
0
2
47
1.14
3497--3537
17
2.4
17
95
0
73
51
0
2
46
1.14
5466--5530
27
2.4
27
92
2
103
56
7
26
9
1.57
6724--6758
2
17.5
2
100
0
70
48
0
0
51
1.00
16481--16522
18
2.4
18
88
4
59
52
11
7
28
1.64
17379--17408
15
2.0
15
93
0
51
43
10
13
33
1.77
19832--19882
24
2.1
25
85
3
68
56
1
1
39
1.22
23219--23289
28
2.7
26
78
19
76
52
1
1
45
1.18
23245--23286
14
2.9
14
85
3
57
50
2
2
45
1.27

Tables:   1

The End!