Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012820.1 Corchorus capsularis cultivar CVL-1 contig12841, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34742

Tables:   1   

This is table  1  of  1  ( 5 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1044--1085
2
21.5
2
95
4
77
50
0
0
50
1.00
7556--7585
2
15.0
2
100
0
60
50
0
0
50
1.00
13144--13694
273
2.0
274
89
4
833
27
13
28
29
1.95
21462--21517
12
4.4
12
71
20
51
39
1
33
25
1.66
32886--32923
18
2.2
18
85
4
51
31
2
2
63
1.22

Tables:   1

The End!