Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012825.1 Corchorus capsularis cultivar CVL-1 contig12846, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  34447

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
21165--21212
17
2.8
17
96
0
87
31
22
16
29
1.96
21622--21680
3
19.0
3
86
6
82
33
3
1
61
1.23
21835--21903
32
2.1
34
89
5
106
34
7
11
46
1.68
21932--21959
2
14.0
2
100
0
56
50
0
0
50
1.00
22401--22444
21
2.1
21
91
8
72
15
34
9
40
1.79
22673--22750
33
2.4
33
93
0
129
15
38
35
10
1.81
22673--22770
33
3.0
32
82
7
117
16
39
34
9
1.80
32628--32654
2
13.5
2
100
0
54
51
0
0
48
1.00
34373--34398
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!