Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012826.1 Corchorus capsularis cultivar CVL-1 contig12847, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  35260

Tables:   1   

This is table  1  of  1  ( 8 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5263--5785
178
2.9
177
90
3
786
37
18
15
28
1.91
10808--10858
8
6.5
8
78
13
52
19
13
17
49
1.80
10806--10870
31
2.1
31
97
0
121
20
10
23
46
1.81
14612--14638
5
5.4
5
100
0
54
77
0
0
22
0.76
19127--19159
16
2.1
16
100
0
66
39
0
24
36
1.56
24685--24712
14
2.0
14
100
0
56
28
14
7
50
1.69
26605--26670
33
2.0
33
85
2
89
53
18
4
24
1.63
29247--29282
2
18.0
2
100
0
72
50
0
0
50
1.00

Tables:   1

The End!