Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012830.1 Corchorus capsularis cultivar CVL-1 contig12851, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  11784

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
50--74
13
1.9
13
100
0
50
48
0
32
20
1.50
3389--3417
15
1.9
15
100
0
58
55
34
10
0
1.34
3375--3420
18
2.6
18
82
0
56
50
34
13
2
1.53
5991--6015
12
2.1
12
100
0
50
56
0
44
0
0.99
7280--7333
22
2.4
24
79
17
71
42
14
12
29
1.83
7295--7336
22
1.9
22
95
0
75
35
16
16
30
1.92
7295--7351
18
2.9
18
87
10
69
40
15
12
31
1.85
7404--7562
48
3.3
47
74
4
149
33
27
26
12
1.92
8061--8146
44
2.0
44
90
0
136
37
15
17
30
1.90
8059--8138
22
3.6
22
87
0
115
37
18
13
30
1.90
10291--11784
326
4.6
319
85
3
1854
34
13
16
35
1.88

Tables:   1

The End!