Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012832.1 Corchorus capsularis cultivar CVL-1 contig12853, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  23300

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
305--367
33
1.9
33
90
0
99
28
22
20
28
1.98
13696--13745
25
2.0
25
100
0
100
12
24
24
40
1.88
15990--16040
25
2.1
23
82
13
59
68
0
3
27
1.07
17542--17588
19
2.5
18
83
10
58
25
2
0
72
0.96
17548--17588
19
2.1
20
90
4
66
26
2
0
70
0.99
21081--21376
109
2.7
109
91
4
450
36
11
2
50
1.50

Tables:   1

The End!