Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012833.1 Corchorus capsularis cultivar CVL-1 contig12854, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25734

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
9557--9614
30
2.0
30
86
3
82
29
10
24
36
1.88
9691--9874
97
1.9
96
95
2
334
27
14
11
46
1.79
14329--14394
3
22.0
3
96
0
123
68
0
31
0
0.90
19745--19771
14
1.9
14
100
0
54
81
0
0
18
0.69
22439--22497
24
2.5
24
97
0
109
22
28
10
38
1.86
25542--25567
2
13.0
2
100
0
52
50
0
0
50
1.00

Tables:   1

The End!