Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012836.1 Corchorus capsularis cultivar CVL-1 contig12857, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  27865

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5131--5159
5
5.8
5
100
0
58
37
0
62
0
0.96
8841--8883
20
2.1
21
82
4
52
23
18
18
39
1.92
17963--18012
24
2.0
26
81
14
61
46
6
12
36
1.66
22112--22170
30
2.0
30
93
0
100
33
27
16
22
1.95
22502--22530
12
2.4
12
100
0
58
48
13
0
37
1.43
26042--26080
20
1.9
21
85
15
55
15
12
0
71
1.14

Tables:   1

The End!