Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012837.1 Corchorus capsularis cultivar CVL-1 contig12858, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  5093

Tables:   1   

This is table  1  of  1  ( 6 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
1384--1562
49
3.6
49
77
6
137
41
3
14
40
1.64
1377--1660
51
5.7
50
73
7
182
42
3
14
39
1.63
1377--1658
150
1.9
150
79
10
326
41
3
14
40
1.63
2158--2864
35
20.7
34
83
8
773
37
10
19
32
1.85
2681--2737
16
3.4
16
68
13
51
33
8
26
31
1.87
2158--2864
170
4.1
171
84
8
818
37
10
19
32
1.85

Tables:   1

The End!