Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01001284.1 Corchorus capsularis cultivar CVL-1 contig01284, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  8252

Tables:   1   

This is table  1  of  1  ( 11 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
2961--3060
22
4.5
22
71
10
78
41
12
12
35
1.79
3129--3207
22
3.6
22
76
6
79
34
15
11
39
1.83
4555--4613
23
2.6
22
92
5
100
35
8
10
45
1.68
4687--4730
22
2.0
22
90
0
70
38
18
13
29
1.89
5998--6052
20
2.8
20
80
2
67
34
7
16
41
1.76
6041--6217
22
7.9
22
72
10
74
36
10
14
37
1.81
6088--6236
22
6.6
22
83
4
140
38
9
14
37
1.78
6046--6236
44
4.2
44
76
12
158
38
10
13
37
1.80
6046--6236
66
2.8
68
78
9
169
38
10
13
37
1.80
6248--6272
13
1.9
13
100
0
50
64
4
16
16
1.44
6457--6567
31
3.7
30
76
9
93
32
9
21
36
1.87

Tables:   1

The End!