Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012843.1 Corchorus capsularis cultivar CVL-1 contig12864, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  25695

Tables:   1   

This is table  1  of  1  ( 9 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
129--159
2
16.0
2
93
6
55
51
0
0
48
1.00
1021--1186
87
1.9
88
89
1
262
30
18
25
25
1.98
2156--2202
24
2.0
24
82
0
58
34
19
27
19
1.96
2969--3007
20
2.0
20
89
0
60
25
12
25
35
1.92
7826--7886
28
2.2
29
82
8
81
29
24
18
27
1.98
8035--8077
13
3.3
13
84
9
52
16
6
18
58
1.60
13935--13983
20
2.4
21
80
16
59
53
16
18
12
1.73
15112--15142
2
15.5
2
100
0
62
48
0
0
51
1.00
20429--20489
29
2.1
29
90
6
97
24
29
6
39
1.80

Tables:   1

The End!