Tandem Repeats Finder Program written by:
Gary Benson
Program in Bioinformatics
Boston University
Version 4.09

Please cite:
G. Benson,
"Tandem repeats finder: a program to analyze DNA sequences"
Nucleic Acid Research(1999)
Vol. 27, No. 2, pp. 573-580.

Sequence: AWWV01012845.1 Corchorus capsularis cultivar CVL-1 contig12866, whole genome shotgun sequence
Parameters: 2 7 7 80 10 50 1000
Length:  39114

Tables:   1   

This is table  1  of  1  ( 13 repeats found )

Click on indices to view alignment
Table Explanation

Indices
Period
Size
Copy
Number
Consensus
Size
Percent
Matches
Percent
Indels
Score
A
C
G
T
Entropy
(0-2)
5066--5098
3
11.0
3
100
0
66
66
0
0
33
0.92
7745--7779
5
7.2
5
87
6
54
0
20
0
80
0.72
7745--7791
13
3.4
14
80
13
62
0
19
0
80
0.70
7745--7791
9
5.1
9
80
10
51
0
19
0
80
0.70
19095--19237
12
11.9
12
69
7
67
62
1
6
28
1.29
19287--19326
17
2.4
17
95
0
71
55
2
10
32
1.47
19299--19377
27
3.0
26
78
15
81
58
3
11
26
1.50
20462--20504
22
2.0
21
90
4
68
62
0
11
25
1.29
26816--27159
172
2.0
171
89
1
519
32
20
17
29
1.96
27153--27351
101
2.0
101
93
2
346
24
14
23
37
1.92
30123--30157
17
1.9
17
88
11
52
85
0
11
2
0.69
31569--31594
13
2.0
13
100
0
52
23
0
46
30
1.53
35894--35936
13
3.4
13
83
3
52
37
0
11
51
1.39

Tables:   1

The End!